llama.cpp/examples/model-conversion/scripts/embedding/run-original-model.py
Daniel Bevenius ffba4f29e6
examples : add debug utility/example (#18464)
* examples : add debug utility/example

This commit introduces a new example named llama-debug which is a
utility that is intended to be used to assist with developing/debugging
a converted model.

The motivation for this utilitiy is to assist in model conversion work
to verify that the model produces the expected outputs. It is intended
to replace logits.cpp in examples/model-conversion.

Example usage:
```console
./build/bin/llama-debug \
    -m models/Qwen2.5-0.5B-Instruct.gguf \
    --prompt "Hello, my name is" \
    --save-logits
...
Model add_bos: false
Input prompt: "Hello, my name is"
Token ids (5):
Hello(9707) ,(11)  my(847)  name(829)  is(374)
Data saved to data/llamacpp-Qwen2.5-0.5B-Instruct.bin
Data saved to data/llamacpp-Qwen2.5-0.5B-Instruct.txt
Prompt saved to data/llamacpp-Qwen2.5-0.5B-Instruct-prompt.txt
Tokens saved to data/llamacpp-Qwen2.5-0.5B-Instruct-tokens.bin
```

For more details about the options available for this example, please
refer to examples/debug/README.md.

* throw runtime error instead of logging error

* remove params.warmup and enable the warmup/nowarmup option

* model-conversion : remove logits.cpp

This commit removes logits.cpp in favor of using llama-debug for
generating logits and embeddings.

* examples : remove model-conversion directory

This was missed in the previous commit.

* model-conversion : add support for saving prompt and token ids

This commit add support for storing the prompt and the token ids for the
prompt when running the original models.

The motivation for this is that this will allow us to compare the prompt
and the tokens generated for the prompt when verifing the converted
model. Currently it is possible that even if the same prompt is used
that the tokens generated are different if there is a difference in the
tokenization between the original and converted model which would
currently go unnoticed (the verification will most likely fail but it
might not be obvious why).

* squash! model-conversion : add support for saving prompt and token ids

fix pyright errors.

* model-conversion : add compare_tokens utility

This commit adds a script to compare token outputs between original and
converted models.

Example usage:
```console
(venv) $ ./scripts/utils/compare_tokens.py pytorch-gemma-3-270m-it llamacpp-gemma-3-270m-it-bf16

Comparing tokens between:
  Original : pytorch-gemma-3-270m-it (6 tokens)
  Converted: llamacpp-gemma-3-270m-it-bf16 (6 tokens)

 All 6 tokens match!
```
And there is a verbose flag that will also print out the prompts:
```console
(venv) $ ./scripts/utils/compare_tokens.py pytorch-gemma-3-270m-it llamacpp-gemma-3-270m-it-bf16 -v

Original model prompt (pytorch-gemma-3-270m-it):
  prompt: Hello, my name is
n_tokens: 6
token ids: 2, 9259, 236764, 1041, 1463, 563

Converted model prompt (llamacpp-gemma-3-270m-it-bf16):
  prompt: Hello, my name is
n_tokens: 6
token ids: 2, 9259, 236764, 1041, 1463, 563

Comparing tokens between:
  Original : pytorch-gemma-3-270m-it (6 tokens)
  Converted: llamacpp-gemma-3-270m-it-bf16 (6 tokens)

 All 6 tokens match!
```

* model-conversion : add token comparison to verifiction scripts

This commit add the calling of the compare_tokens function in
compare-logits.py and semantic_check.py to ensure that the token ids
that the tokenizers procoduce are the same before proceeding with
verifying the logits/embeddings.

Placing them in the existing scripts instead calling them separately
ensures that the token comparison is always done prior to the
logit/embedding verifications.

Follow up commit/pr could refactor the causal logits verification into
a single script instead of the two that exist now. This would reduce the
code and make it consistent with the embeddings verficiation which only
has a single script.

* debug : use llama_model_n_embd_out

This commit updates the debug example to use the new function
llama_model_n_embd_out instead of llama_model_n_embd.

The motivation for this change is to support late interation retriever
models, like LFM2-ColBert-350M, where the output embeddings are down
projected to a lower dimension.

* debug : add print_usage function

This commit adds a print_usage function that is passed to the
common_params_parse.

The motivation for this is that this enables a specific usage message
which will be printed after all the options, for example:
```console
example usage:

  Print tensors:

  ./build/bin/llama-debug -m model.gguf -p "Hello my name is" --verbose

  The tensors to be printed can be filtered with --tensor-filter option.

  Save logits/embeddings:

  ./build/bin/llama-debug -m model.gguf -p "Hello my name is" --save-logits

  Add --embedding to save embeddings
```
2026-01-07 10:42:19 +01:00

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#!/usr/bin/env python3
import argparse
import os
import sys
import importlib
from transformers import AutoTokenizer, AutoConfig, AutoModel
import torch
# Add parent directory to path for imports
sys.path.insert(0, os.path.join(os.path.dirname(__file__), '..'))
from utils.common import save_output_data
def parse_arguments():
parser = argparse.ArgumentParser(description='Run original embedding model')
parser.add_argument(
'--model-path',
'-m',
help='Path to the model'
)
parser.add_argument(
'--prompts-file',
'-p',
help='Path to file containing prompts (one per line)'
)
parser.add_argument(
'--use-sentence-transformers',
action='store_true',
help=('Use SentenceTransformer to apply all numbered layers '
'(01_Pooling, 02_Dense, 03_Dense, 04_Normalize)')
)
parser.add_argument(
'--device',
'-d',
help='Device to use (cpu, cuda, mps, auto)',
default='auto'
)
return parser.parse_args()
def load_model_and_tokenizer(model_path, use_sentence_transformers=False, device="auto"):
if device == "cpu":
device_map = {"": "cpu"}
print("Forcing CPU usage")
elif device == "auto":
# On Mac, "auto" device_map can cause issues with accelerate
# So we detect the best device manually
if torch.cuda.is_available():
device_map = {"": "cuda"}
print("Using CUDA")
elif torch.backends.mps.is_available():
device_map = {"": "mps"}
print("Using MPS (Apple Metal)")
else:
device_map = {"": "cpu"}
print("Using CPU")
else:
device_map = {"": device}
if use_sentence_transformers:
from sentence_transformers import SentenceTransformer
print("Using SentenceTransformer to apply all numbered layers")
model = SentenceTransformer(model_path)
tokenizer = model.tokenizer
config = model[0].auto_model.config # type: ignore
else:
tokenizer = AutoTokenizer.from_pretrained(model_path)
config = AutoConfig.from_pretrained(model_path, trust_remote_code=True)
# This can be used to override the sliding window size for manual testing. This
# can be useful to verify the sliding window attention mask in the original model
# and compare it with the converted .gguf model.
if hasattr(config, 'sliding_window'):
original_sliding_window = config.sliding_window
print(f"Modified sliding window: {original_sliding_window} -> {config.sliding_window}")
unreleased_model_name = os.getenv('UNRELEASED_MODEL_NAME')
print(f"Using unreleased model: {unreleased_model_name}")
if unreleased_model_name:
model_name_lower = unreleased_model_name.lower()
unreleased_module_path = f"transformers.models.{model_name_lower}.modular_{model_name_lower}"
class_name = f"{unreleased_model_name}Model"
print(f"Importing unreleased model module: {unreleased_module_path}")
try:
model_class = getattr(importlib.import_module(unreleased_module_path), class_name)
model = model_class.from_pretrained(
model_path,
device_map=device_map,
offload_folder="offload",
trust_remote_code=True,
config=config
)
except (ImportError, AttributeError) as e:
print(f"Failed to import or load model: {e}")
sys.exit(1)
else:
model = AutoModel.from_pretrained(
model_path,
device_map=device_map,
offload_folder="offload",
trust_remote_code=True,
config=config
)
print(f"Model class: {type(model)}")
print(f"Model file: {type(model).__module__}")
# Verify the model is using the correct sliding window
if hasattr(model.config, 'sliding_window'): # type: ignore
print(f"Model's sliding_window: {model.config.sliding_window}") # type: ignore
else:
print("Model config does not have sliding_window attribute")
return model, tokenizer, config
def get_prompt(args):
if args.prompts_file:
try:
with open(args.prompts_file, 'r', encoding='utf-8') as f:
return f.read().strip()
except FileNotFoundError:
print(f"Error: Prompts file '{args.prompts_file}' not found")
sys.exit(1)
except Exception as e:
print(f"Error reading prompts file: {e}")
sys.exit(1)
else:
return "Hello world today"
def main():
args = parse_arguments()
model_path = os.environ.get('EMBEDDING_MODEL_PATH', args.model_path)
if model_path is None:
print("Error: Model path must be specified either via --model-path argument "
"or EMBEDDING_MODEL_PATH environment variable")
sys.exit(1)
# Determine if we should use SentenceTransformer
use_st = (
args.use_sentence_transformers or os.environ.get('USE_SENTENCE_TRANSFORMERS', '').lower() in ('1', 'true', 'yes')
)
model, tokenizer, config = load_model_and_tokenizer(model_path, use_st, args.device)
# Get the device the model is on
if not use_st:
device = next(model.parameters()).device
else:
# For SentenceTransformer, get device from the underlying model
device = next(model[0].auto_model.parameters()).device # type: ignore
model_name = os.path.basename(model_path)
prompt_text = get_prompt(args)
texts = [prompt_text]
with torch.no_grad():
if use_st:
embeddings = model.encode(texts, convert_to_numpy=True)
all_embeddings = embeddings # Shape: [batch_size, hidden_size]
encoded = tokenizer(
texts,
padding=True,
truncation=True,
return_tensors="pt"
)
tokens = encoded['input_ids'][0]
token_ids = tokens.cpu().tolist()
token_strings = tokenizer.convert_ids_to_tokens(tokens)
for i, (token_id, token_str) in enumerate(zip(tokens, token_strings)):
print(f"{token_id:6d} -> '{token_str}'")
print(f"Embeddings shape (after all SentenceTransformer layers): {all_embeddings.shape}")
print(f"Embedding dimension: {all_embeddings.shape[1] if len(all_embeddings.shape) > 1 else all_embeddings.shape[0]}") # type: ignore
else:
# Standard approach: use base model output only
encoded = tokenizer(
texts,
padding=True,
truncation=True,
return_tensors="pt"
)
tokens = encoded['input_ids'][0]
token_ids = tokens.cpu().tolist()
token_strings = tokenizer.convert_ids_to_tokens(tokens)
for i, (token_id, token_str) in enumerate(zip(tokens, token_strings)):
print(f"{token_id:6d} -> '{token_str}'")
# Move inputs to the same device as the model
encoded = {k: v.to(device) for k, v in encoded.items()}
outputs = model(**encoded)
hidden_states = outputs.last_hidden_state # Shape: [batch_size, seq_len, hidden_size]
all_embeddings = hidden_states[0].float().cpu().numpy() # Shape: [seq_len, hidden_size]
print(f"Hidden states shape: {hidden_states.shape}")
print(f"All embeddings shape: {all_embeddings.shape}")
print(f"Embedding dimension: {all_embeddings.shape[1]}")
if len(all_embeddings.shape) == 1:
n_embd = all_embeddings.shape[0] # type: ignore
n_embd_count = 1
all_embeddings = all_embeddings.reshape(1, -1)
else:
n_embd = all_embeddings.shape[1] # type: ignore
n_embd_count = all_embeddings.shape[0] # type: ignore
print()
for j in range(n_embd_count):
embedding = all_embeddings[j]
print(f"embedding {j}: ", end="")
# Print first 3 values
for i in range(min(3, n_embd)):
print(f"{embedding[i]:9.6f} ", end="")
print(" ... ", end="")
# Print last 3 values
for i in range(n_embd - 3, n_embd):
print(f"{embedding[i]:9.6f} ", end="")
print() # New line
print()
flattened_embeddings = all_embeddings.flatten()
print(f"Total values: {len(flattened_embeddings)} ({n_embd_count} embeddings × {n_embd} dimensions)")
print("")
save_output_data(flattened_embeddings, token_ids, prompt_text, model_name, type_suffix="-embeddings")
if __name__ == "__main__":
main()